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  • Top cofit genes for GFF117 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3450 Transcriptional regulator, LacI family no 0.81
    2 GFF2597 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.70
    3 GFF1971 Creatinine amidohydrolase (EC 3.5.2.10) no 0.69
    4 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) no 0.68
    5 GFF2370 L-carnitine dehydratase/bile acid-inducible protein F no 0.68
    6 GFF4412 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.68
    7 GFF2359 Heat-inducible transcription repressor HrcA 0.43 0.68
    8 GFF4482 Transcriptional regulator MraZ no 0.68
    9 GFF561 Ribonucleotide reductase transcriptional regulator NrdR 0.48 0.67
    10 GFF4688 Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC no 0.67
    11 GFF4192 no description no 0.67
    12 GFF5127 no description no 0.67
    13 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) no 0.66
    14 GFF5404 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) no 0.66
    15 GFF401 PhbF no 0.66
    16 GFF4592 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) no 0.65
    17 GFF6194 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.65
    18 GFF2298 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) no 0.65
    19 GFF705 Transcriptional regulator, AcrR family no 0.65
    20 GFF270 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117) no 0.64

    Or look for negative cofitness