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  • Top cofit genes for PS417_05930 from Pseudomonas simiae WCS417

    spermidine/putrescine ABC transporter permease
    SEED: Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)
    KEGG: putative spermidine/putrescine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_14575 MFS transporter no 0.30
    2 PS417_04285 protease TldD 0.77 0.26
    3 PS417_11395 hypothetical protein no 0.25
    4 PS417_01340 agmatine deiminase no 0.25
    5 PS417_02960 ribosomal protein L11 methyltransferase no 0.25
    6 PS417_14405 ABC transporter permease no 0.24
    7 PS417_07815 hypothetical protein no 0.24
    8 PS417_16510 Clp protease ClpX 0.35 0.24
    9 PS417_16555 cupin no 0.23
    10 PS417_22125 porin 0.18 0.23
    11 PS417_04705 hypothetical protein no 0.23
    12 PS417_02975 3-dehydroquinate dehydratase no 0.23
    13 PS417_04340 ribosome hibernation promoting factor HPF no 0.23
    14 PS417_26370 RNA helicase no 0.22
    15 PS417_04430 uracil transporter 0.35 0.22
    16 PS417_22575 exonuclease I no 0.22
    17 PS417_20920 D-alanyl-D-alanine carboxypeptidase 0.31 0.22
    18 PS417_14835 amidase no 0.22
    19 PS417_05545 amino acid ABC transporter ATP-binding protein no 0.21
    20 PS417_24335 50S rRNA methyltransferase no 0.21

    Or look for negative cofitness