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  • Top cofit genes for PS417_05870 from Pseudomonas simiae WCS417

    RNA-binding protein S4
    SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase F

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04215 malate transporter no 0.20
    2 PS417_20600 hypothetical protein no 0.19
    3 PS417_06755 porin no 0.18
    4 PS417_08485 alpha/beta hydrolase no 0.18
    5 PS417_23700 aromatic amino acid transporter no 0.17
    6 PS417_13760 transcriptional regulator no 0.16
    7 PS417_20715 cytochrome Cbb3 no 0.16
    8 PS417_17210 MFS transporter no 0.16
    9 PS417_12565 2-dehydro-3-deoxygluconokinase no 0.16
    10 PS417_00735 hypothetical protein no 0.16
    11 PS417_20605 hypothetical protein no 0.15
    12 PS417_13135 hypothetical protein no 0.15
    13 PS417_26100 amino acid ABC transporter 0.41 0.15
    14 PS417_16810 acyl-CoA dehydrogenase no 0.14
    15 PS417_14350 multidrug DMT transporter permease no 0.14
    16 PS417_06540 membrane protein 0.29 0.14
    17 PS417_20415 reverse transcriptase no 0.14
    18 PS417_05505 adenosylmethionine-8-amino-7-oxononanoate aminotransferase no 0.14
    19 PS417_22380 hypothetical protein 0.52 0.14
    20 PS417_28515 16S rRNA methyltransferase 0.21 0.14

    Or look for negative cofitness