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Cofit
Protein
Homologs
Top cofit genes for GFF1152 from
Variovorax sp. SCN45
Lysine decarboxylase family
SEED: Lysine decarboxylase family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3256
Peptidase, M20/M25/M40 family
no
0.59
2
GFF3273
Translation initiation factor 2
no
0.55
3
GFF3053
Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54)
no
0.54
4
GFF7100
similar to protocatechuate 4,5-dioxygenase beta chain
no
0.53
5
GFF6720
no description
no
0.51
6
GFF845
dTDP-glucose 4,6-dehydratase
no
0.51
7
GFF1948
Phage integrase
no
0.50
8
GFF5107
Transcriptional regulator, LysR family
no
0.49
9
GFF3173
Transcriptional regulator, IclR family
no
0.49
10
GFF3128
T6SS PAAR-repeat protein / RhaS protein
0.32
0.49
11
GFF6465
hypothetical protein
no
0.48
12
GFF2711
hypothetical protein
no
0.48
13
GFF1094
Phosphate ABC transporter, permease protein PstA (TC 3.A.1.7.1)
0.58
0.47
14
GFF6142
2-aminoethylphosphonate ABC transporter permease protein
no
0.47
15
GFF4988
Gentisate 1,2-dioxygenase (EC 1.13.11.4)
no
0.47
16
GFF6455
Bll3817 protein
no
0.47
17
GFF1775
no description
no
0.46
18
GFF5053
Uncharacterized protein SPO0681
no
0.46
19
GFF427
no description
no
0.45
20
GFF908
Putative oxidoreductase
0.28
0.45
Or look for
negative cofitness