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  • Top cofit genes for GFF1152 from Variovorax sp. SCN45

    Lysine decarboxylase family
    SEED: Lysine decarboxylase family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3256 Peptidase, M20/M25/M40 family no 0.59
    2 GFF3273 Translation initiation factor 2 no 0.55
    3 GFF3053 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) no 0.54
    4 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain no 0.53
    5 GFF6720 no description no 0.51
    6 GFF845 dTDP-glucose 4,6-dehydratase no 0.51
    7 GFF1948 Phage integrase no 0.50
    8 GFF5107 Transcriptional regulator, LysR family no 0.49
    9 GFF3173 Transcriptional regulator, IclR family no 0.49
    10 GFF3128 T6SS PAAR-repeat protein / RhaS protein 0.32 0.49
    11 GFF6465 hypothetical protein no 0.48
    12 GFF2711 hypothetical protein no 0.48
    13 GFF1094 Phosphate ABC transporter, permease protein PstA (TC 3.A.1.7.1) 0.58 0.47
    14 GFF6142 2-aminoethylphosphonate ABC transporter permease protein no 0.47
    15 GFF4988 Gentisate 1,2-dioxygenase (EC 1.13.11.4) no 0.47
    16 GFF6455 Bll3817 protein no 0.47
    17 GFF1775 no description no 0.46
    18 GFF5053 Uncharacterized protein SPO0681 no 0.46
    19 GFF427 no description no 0.45
    20 GFF908 Putative oxidoreductase 0.28 0.45

    Or look for negative cofitness