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  • Top cofit genes for GFF115 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6884 FIG00932717: hypothetical protein no 0.53
    2 GFF1272 no description no 0.53
    3 GFF3238 no description no 0.52
    4 GFF1018 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) no 0.51
    5 GFF434 OsmC/Ohr family protein no 0.50
    6 GFF1957 no description no 0.49
    7 GFF7156 hypothetical protein no 0.49
    8 GFF6286 Probable signal peptide protein no 0.49
    9 GFF344 no description no 0.48
    10 GFF67 Glycosyl transferase, group 1 no 0.48
    11 GFF4700 Various polyols ABC transporter, permease protein 1 no 0.47
    12 GFF2687 Protein containing domains DUF404, DUF407, DUF403 no 0.47
    13 GFF357 SOS-response repressor and protease LexA (EC 3.4.21.88) no 0.47
    14 GFF3091 Septum-associated cell division protein DedD no 0.47
    15 GFF2856 Transcriptional regulator, LysR family no 0.45
    16 GFF3366 Septum site-determining protein MinD no 0.45
    17 GFF1632 RNA polymerase ECF-type sigma factor no 0.45
    18 GFF3410 Transcriptional regulator, AraC family no 0.45
    19 GFF2528 ABC transporter, ATP-binding protein PA3838 no 0.45
    20 GFF6865 Transcriptional regulator, Crp/Fnr family no 0.44

    Or look for negative cofitness