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  • Top cofit genes for GFF115 from Sphingobium sp. HT1-2

    DNA topoisomerase I (EC 5.99.1.2)
    SEED: DNA topoisomerase I (EC 5.99.1.2)
    KEGG: DNA topoisomerase I

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2782 Two-component transcriptional response regulator, LuxR family no 0.76
    2 GFF1134 hypothetical protein no 0.76
    3 GFF288 hypothetical protein no 0.75
    4 GFF3400 L-lactate dehydrogenase no 0.74
    5 GFF3250 RND efflux system, inner membrane transporter no 0.74
    6 GFF4434 integrase no 0.74
    7 GFF2904 Uncharacterized MFS-type transporter no 0.70
    8 GFF2527 hypothetical protein no 0.70
    9 GFF5155 peptidoglycan binding domain-containing protein no 0.67
    10 GFF1194 transcriptional regulator, GntR family no 0.66
    11 GFF884 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.66
    12 GFF901 Transcriptional regulator, TetR family no 0.66
    13 GFF2494 TspO and MBR like proteins no 0.66
    14 GFF2902 HtrA protease/chaperone protein 0.65 0.66
    15 GFF1769 Similar to phage capsid and scaffold / Gene Transfer Agent (GTA) ORFG12 no 0.65
    16 GFF3759 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) 0.80 0.65
    17 GFF2015 Glycerol uptake facilitator protein no 0.65
    18 GFF3840 hypothetical protein no 0.65
    19 GFF4150 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.65
    20 GFF2942 hypothetical protein no 0.65

    Or look for negative cofitness