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  • Top cofit genes for PS417_05820 from Pseudomonas simiae WCS417

    recombinase RecX
    SEED: Regulatory protein RecX
    KEGG: regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25395 excinuclease ABC subunit A 0.70 0.34
    2 PS417_15115 exonuclease SbcD no 0.32
    3 PS417_24070 recombination and repair protein 0.76 0.31
    4 PS417_20800 recombination protein RecR 0.60 0.31
    5 PS417_13500 ATP-dependent DNA helicase 0.34 0.30
    6 PS417_18685 excinuclease ABC subunit B 0.69 0.30
    7 PS417_10725 excinuclease ABC subunit C 0.64 0.29
    8 PS417_22855 ssDNA exonuclease RecJ 0.54 0.28
    9 PS417_22895 tyrosine recombinase XerD 0.55 0.28
    10 PS417_00015 recombinase RecF 0.59 0.26
    11 PS417_22445 ATP-dependent DNA helicase RuvB 0.35 0.25
    12 PS417_15120 chromosome segregation protein SMC no 0.24
    13 PS417_15110 protein BatD 0.39 0.24
    14 PS417_05815 recombinase RecA 0.76 0.24
    15 PS417_15105 membrane protein 0.44 0.24
    16 PS417_15085 ATPase AAA 0.41 0.23
    17 PS417_07635 transcription-repair coupling factor 0.60 0.23
    18 PS417_12135 peptidylprolyl isomerase no 0.23
    19 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase 0.53 0.22
    20 PS417_01340 agmatine deiminase no 0.22

    Or look for negative cofitness