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  • Top cofit genes for GFF1145 from Sphingobium sp. HT1-2

    RNA-binding protein Hfq / RNA-binding protein Hfq
    SEED: RNA-binding protein Hfq
    KEGG: host factor-I protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF957 Transcriptional regulator, LysR family no 0.82
    2 GFF4614 Transcriptional regulator, AcrR family no 0.79
    3 GFF1249 Capsular polysaccharide biosynthesis protein no 0.79
    4 GFF4190 [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme no 0.78
    5 GFF3678 hypothetical protein no 0.78
    6 GFF2766 Cytochrome c precursor no 0.77
    7 GFF4106 PDZ domain family protein no 0.76
    8 GFF5351 hypothetical protein no 0.75
    9 GFF4205 Ubiquinol-cytochrome C chaperone no 0.75
    10 GFF2254 DksA family protein PA5536 (no Zn-finger) no 0.75
    11 GFF4046 anti-FecI sigma factor FecR no 0.75
    12 GFF366 NADH:ubiquinone oxidoreductase 17.2 kD subunit no 0.75
    13 GFF5034 hypothetical protein no 0.74
    14 GFF889 Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190) no 0.73
    15 GFF4160 Ankyrin no 0.73
    16 GFF1081 hypothetical protein no 0.73
    17 GFF1660 NADP-dependent malic enzyme (EC 1.1.1.40) no 0.73
    18 GFF2558 Peptidase, M23/M37 family no 0.73
    19 GFF954 Regulatory protein LuxR no 0.72
    20 GFF3090 hypothetical protein no 0.71

    Or look for negative cofitness