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  • Top cofit genes for PS417_00575 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16370 chemotaxis protein CheY 0.79 0.51
    2 PS417_10720 chemotaxis protein CheY 0.38 0.51
    3 PS417_28265 pyridoxamine kinase no 0.47
    4 PS417_06365 RNA polymerase sigma factor 0.93 0.44
    5 PS417_16160 ABC transporter substrate-binding protein no 0.43
    6 PS417_06970 LysR family transcriptional regulator no 0.43
    7 PS417_19560 amino acid ABC transporter substrate-binding protein no 0.42
    8 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.40
    9 PS417_01015 polar amino acid ABC transporter permease 0.38 0.39
    10 PS417_03725 acyltransferase 0.30 0.38
    11 PS417_13425 cupin no 0.38
    12 PS417_12550 chemotaxis protein no 0.37
    13 PS417_03070 LuxR family transcriptional regulator no 0.36
    14 PS417_24885 transcriptional regulator no 0.36
    15 PS417_12920 endoribonuclease no 0.36
    16 PS417_09665 dimethylglycine dehydrogenase 0.13 0.36
    17 PS417_12610 RNA polymerase sigma factor no 0.35
    18 PS417_21045 cysteine synthase no 0.34
    19 PS417_24595 histidine kinase no 0.34
    20 PS417_01895 poly(R)-hydroxyalkanoic acid synthase 0.32 0.34

    Or look for negative cofitness