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  • Top cofit genes for GFF114 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2547 Type I antifreeze protein no 0.64
    2 GFF1051 no description no 0.56
    3 GFF6543 Transcriptional regulator, LysR family no 0.54
    4 GFF306 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.53
    5 GFF499 hypothetical protein no 0.51
    6 GFF7076 no description no 0.51
    7 GFF2884 Pyruvate:Oxaloacetate transcarboxylase domain protein no 0.50
    8 GFF4985 Tricarboxylate transport protein TctC no 0.50
    9 GFF2471 Outer membrane porin protein 32 precursor no 0.50
    10 GFF3025 Proton/sodium-glutamate symport protein no 0.50
    11 GFF1465 ABC transporter spermidine/putrescine-binding protein no 0.50
    12 GFF626 CzcABC family efflux RND transporter, transmembrane protein no 0.49
    13 GFF3536 Alcohol dehydrogenase (EC 1.1.1.1) no 0.49
    14 GFF2084 Phosphatidate cytidylyltransferase (EC 2.7.7.41) no 0.49
    15 GFF7391 hypothetical protein no 0.49
    16 GFF1591 FIG066100: Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor no 0.49
    17 GFF153 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.48
    18 GFF2899 no description no 0.48
    19 GFF2965 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.47
    20 GFF591 Renalase (EC 1.6.3.5), oxidases 1,2-dihydro- and 1,6-dihydro- beta-NAD(P)H isomers back to NAD(P) no 0.47

    Or look for negative cofitness