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Cofit
Protein
Homologs
Top cofit genes for GFF1130 from
Sphingobium sp. HT1-2
hypothetical protein
KEGG: putative polymerase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4679
Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily
no
0.92
2
GFF1487
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.88
3
GFF4362
hypothetical protein
no
0.87
4
GFF3513
General secretion pathway protein J
no
0.86
5
GFF3500
Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1)
no
0.85
6
GFF3104
Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)
no
0.85
7
GFF2735
Uncharacterized MFS-type transporter
no
0.82
8
GFF4086
TonB-dependent receptor
no
0.82
9
GFF3134
hypothetical protein
no
0.81
10
GFF2458
hypothetical protein
no
0.81
11
GFF1376
Cytochrome c2
no
0.81
12
GFF4247
hypothetical protein
no
0.81
13
GFF995
Tol-Pal system beta propeller repeat protein TolB
no
0.81
14
GFF4593
hypothetical protein
no
0.80
15
GFF3124
hypothetical protein
no
0.80
16
GFF4351
Transcriptional regulator, LysR family
no
0.80
17
GFF3074
LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24)
no
0.79
18
GFF1255
Chain length determinant exopolysaccharide biosynthesis protein EpsF
no
0.79
19
GFF3662
Uracil-DNA glycosylase, family 1 (EC 3.2.2.27)
no
0.79
20
GFF696
hypothetical protein
no
0.79
Or look for
negative cofitness