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  • Top cofit genes for PS417_05730 from Pseudomonas simiae WCS417

    tail protein
    SEED: Phage tail fibers

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05715 baseplate assembly protein no 0.24
    2 PS417_23730 LysR family transcriptional regulator no 0.23
    3 PS417_15935 Rrf2 family transcriptional regulator no 0.23
    4 PS417_13840 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) no 0.22
    5 PS417_20580 isocitrate dehydrogenase 0.39 0.22
    6 PS417_22385 quinolinate synthase A 0.27 0.22
    7 PS417_21750 acetyl-CoA synthetase no 0.21
    8 PS417_25705 lipoate--protein ligase no 0.21
    9 PS417_12735 peroxidase no 0.21
    10 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) no 0.20
    11 PS417_01570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase no 0.19
    12 PS417_16065 3-phytase no 0.19
    13 PS417_05840 LuxR family transcriptional regulator no 0.19
    14 PS417_11845 RpiR family transcriptional regulator no 0.19
    15 PS417_14075 hypothetical protein no 0.19
    16 PS417_22390 lactate dehydrogenase no 0.18
    17 PS417_26040 malate synthase no 0.18
    18 PS417_19965 histidine kinase no 0.18
    19 PS417_05440 chemotaxis protein CheY no 0.18
    20 PS417_13015 6-hydroxynicotinate 3-monooxygenase no 0.18

    Or look for negative cofitness