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Cofit
Protein
Homologs
Top cofit genes for PS417_05730 from
Pseudomonas simiae WCS417
tail protein
SEED: Phage tail fibers
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_05715
baseplate assembly protein
no
0.24
2
PS417
_23730
LysR family transcriptional regulator
no
0.23
3
PS417
_15935
Rrf2 family transcriptional regulator
no
0.23
4
PS417
_13840
isobutyryl-CoA dehydrogenase (EC 1.3.8.5)
(from data)
no
0.22
5
PS417
_20580
isocitrate dehydrogenase
0.39
0.22
6
PS417
_22385
quinolinate synthase A
0.27
0.22
7
PS417
_21750
acetyl-CoA synthetase
no
0.21
8
PS417
_25705
lipoate--protein ligase
no
0.21
9
PS417
_12735
peroxidase
no
0.21
10
PS417
_13835
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
(from data)
no
0.20
11
PS417
_01570
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
no
0.19
12
PS417
_16065
3-phytase
no
0.19
13
PS417
_05840
LuxR family transcriptional regulator
no
0.19
14
PS417
_11845
RpiR family transcriptional regulator
no
0.19
15
PS417
_14075
hypothetical protein
no
0.19
16
PS417
_22390
lactate dehydrogenase
no
0.18
17
PS417
_26040
malate synthase
no
0.18
18
PS417
_19965
histidine kinase
no
0.18
19
PS417
_05440
chemotaxis protein CheY
no
0.18
20
PS417
_13015
6-hydroxynicotinate 3-monooxygenase
no
0.18
Or look for
negative cofitness