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  • Top cofit genes for GFF112 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
    SEED: ABC transporter substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7177 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B no 0.62
    2 GFF4296 hypothetical protein no 0.59
    3 GFF7161 Transcriptional regulator, LysR family no 0.58
    4 GFF5081 Amidohydrolase family protein no 0.55
    5 GFF5785 FIG00931285: hypothetical protein no 0.55
    6 GFF2939 hypothetical protein no 0.55
    7 GFF4039 Heavy metal RND efflux outer membrane protein, CzcC family no 0.53
    8 GFF1042 Glutathione S-transferase, unnamed subgroup 2 (EC 2.5.1.18) no 0.53
    9 GFF5743 Flagellar motor switch protein FliM no 0.53
    10 GFF5709 no description no 0.53
    11 GFF2723 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit no 0.53
    12 GFF6568 hypothetical protein no 0.52
    13 GFF803 MutT/Nudix family protein no 0.52
    14 GFF3441 Hypothetical protein VC0266 (sugar utilization related?) no 0.52
    15 GFF6813 no description no 0.52
    16 GFF3549 FIG01127675: hypothetical protein no 0.51
    17 GFF1481 L-carnitine dehydratase/bile acid-inducible protein F no 0.51
    18 GFF88 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) no 0.51
    19 GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.51
    20 GFF5772 Flagellar biosynthesis protein FlhF no 0.51

    Or look for negative cofitness