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  • Top cofit genes for PS417_05645 from Pseudomonas simiae WCS417

    LuxR family transcriptional regulator
    SEED: DNA-binding response regulator, LuxR family
    KEGG: two-component system, NarL family, response regulator EvgA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02715 hypothetical protein no 0.25
    2 PS417_20580 isocitrate dehydrogenase no 0.24
    3 PS417_13695 porin no 0.22
    4 PS417_18170 phenol degradation protein meta no 0.22
    5 PS417_09850 hypothetical protein no 0.21
    6 PS417_19620 hypothetical protein 0.14 0.21
    7 PS417_00535 Holliday junction resolvase no 0.20
    8 PS417_21580 chemotaxis protein CheW no 0.20
    9 PS417_19820 histidine kinase no 0.20
    10 PS417_19605 hypothetical protein no 0.19
    11 PS417_22190 diguanylate cyclase 0.34 0.19
    12 PS417_22150 D-mannose isomerase (EC 5.3.1.7) (from data) no 0.19
    13 PS417_04280 carbon-nitrogen hydrolase 0.24 0.19
    14 PS417_19625 histidine kinase 0.31 0.19
    15 PS417_21750 acetyl-CoA synthetase 0.60 0.19
    16 PS417_07860 hypothetical protein no 0.19
    17 PS417_03120 histidine kinase no 0.18
    18 PS417_01020 glutamine ABC transporter permease no 0.18
    19 PS417_18570 peptidoglycan-binding protein no 0.18
    20 PS417_13140 oxidoreductase no 0.18

    Or look for negative cofitness