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  • Top cofit genes for GFF1107 from Variovorax sp. SCN45

    NAD(FAD)-utilizing dehydrogenases
    SEED: NAD(FAD)-utilizing dehydrogenases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF491 no description no 0.61
    2 GFF6032 Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1) no 0.59
    3 GFF6033 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) 0.49 0.58
    4 GFF1629 Ferric reductase (1.6.99.14) no 0.58
    5 GFF6784 D-amino acid dehydrogenase (EC 1.4.99.6) 0.33 0.57
    6 GFF640 no description no 0.57
    7 GFF1644 hypothetical protein no 0.57
    8 GFF3091 Septum-associated cell division protein DedD no 0.56
    9 GFF5673 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) no 0.56
    10 GFF911 KEGG: transcriptional regulator no 0.56
    11 GFF3634 hypothetical protein no 0.56
    12 GFF5263 Ferric iron ABC transporter, permease protein no 0.55
    13 GFF7172 Manganese transport protein MntH no 0.55
    14 GFF1846 Nucleoside ABC transporter, permease protein 2 no 0.55
    15 GFF3546 Chaperone protein HtpG no 0.55
    16 GFF1388 Paraquat-inducible protein A no 0.54
    17 GFF6324 Kup system potassium uptake protein no 0.54
    18 GFF6328 LPS-assembly lipoprotein LptE no 0.54
    19 GFF5618 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.54
    20 GFF6752 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 1.2.1.91) / 2-oxepin-2(3H)-ylideneacetyl-CoA hydrolase (EC 3.3.2.12) no 0.54

    Or look for negative cofitness