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  • Top cofit genes for GFF1106 from Variovorax sp. SCN45

    UvrD/REP helicase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1105 Helicase no 0.46
    2 GFF2611 Fructose ABC transporter, substrate-binding component FrcB no 0.43
    3 GFF6557 hypothetical protein no 0.41
    4 GFF5598 putative phospholipase D family protein no 0.41
    5 GFF6830 penicillin amidase family protein no 0.40
    6 GFF2197 Type I secretion system ATPase, LssB family LapB no 0.40
    7 GFF1760 Probable transmembrane protein no 0.39
    8 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.39
    9 GFF3149 RND efflux system, inner membrane transporter no 0.39
    10 GFF2433 Putative OMR family iron-siderophore receptor precursor no 0.38
    11 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.38
    12 GFF6683 Efflux ABC transporter, permease protein no 0.38
    13 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.38
    14 GFF4786 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.38
    15 GFF5605 D-xylose ABC transporter, ATP-binding protein XylG no 0.38
    16 GFF786 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.38
    17 GFF6022 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) no 0.37
    18 GFF2102 no description no 0.37
    19 GFF4069 DNA-binding heavy metal response regulator no 0.37
    20 GFF1154 Putative transmembrane protein no 0.37

    Or look for negative cofitness