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Cofit
Protein
Homologs
Top cofit genes for GFF1105 from
Variovorax sp. SCN45
Helicase
SEED: Helicase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7018
ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
no
0.47
2
GFF1106
UvrD/REP helicase
no
0.46
3
GFF6258
Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase (EC 4.7.1.1)
no
0.44
4
GFF1984
Phospholipid and glycerol acyltransferase (EC 2.3.1.51)
no
0.44
5
GFF4839
Transcriptional regulator PA2737, MerR family
no
0.43
6
GFF3889
3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
no
0.43
7
GFF5997
hypothetical protein
no
0.38
8
GFF651
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)
no
0.38
9
GFF3775
Two-component transcriptional response regulator, OmpR family
no
0.38
10
GFF6036
DNA translocase FtsK
no
0.38
11
GFF2707
hypothetical protein
no
0.37
12
GFF7146
Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
no
0.37
13
GFF7295
HPr kinase/phosphorylase
no
0.36
14
GFF6875
hypothetical protein
no
0.36
15
GFF889
FIG00349738: hypothetical protein
no
0.35
16
GFF3624
Putative transmembrane protein
no
0.35
17
GFF5808
Putative oxidoreductase
no
0.34
18
GFF6876
Aminotransferase, DegT/DnrJ/EryC1/StrS family
no
0.34
19
GFF5189
L-arabinolactonase (EC 3.1.1.15)
no
0.34
20
GFF890
Two-component system sensor histidine kinase
no
0.34
Or look for
negative cofitness