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    • Top cofit genes for GFF1102 from Variovorax sp. SCN45

    Uncharacterized oxidoreductase YdgJ
    SEED: Uncharacterized oxidoreductase ydgJ (EC 1.-.-.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6399 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), N-terminal domain no 0.50
    2 GFF212 Ribosome association toxin RatA no 0.48
    3 GFF6126 putative membrane protein no 0.47
    4 GFF3219 hypothetical protein no 0.46
    5 GFF7222 Coenzyme F390 synthetase no 0.45
    6 GFF5259 Na+/solute symporter no 0.45
    7 GFF6506 DNA-binding protein HU-beta no 0.44
    8 GFF3615 Oxidoreductase, short-chain dehydrogenase/reductase family 0.31 0.44
    9 GFF3530 Pseudouridine synthase no 0.44
    10 GFF3960 3'-to-5' oligoribonuclease (orn) no 0.44
    11 GFF606 BUG/TctC family periplasmic protein no 0.44
    12 GFF4747 Quinone oxidoreductase (EC 1.6.5.5) no 0.43
    13 GFF2715 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) no 0.43
    14 GFF4166 Cytidine deaminase (EC 3.5.4.5) no 0.42
    15 GFF6211 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.42
    16 GFF3695 hypothetical protein no 0.42
    17 GFF850 Two-component transcriptional response regulator, LuxR family no 0.42
    18 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.42
    19 GFF658 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.36 0.42
    20 GFF496 Squalene synthase (EC 2.5.1.21) no 0.42

    Or look for negative cofitness