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  • Top cofit genes for GFF11 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, OmpR family
    SEED: DNA-binding heavy metal response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1286 FIG00932541: hypothetical protein no 0.56
    2 GFF1479 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.55
    3 GFF2164 Transcriptional regulator, IclR family no 0.54
    4 GFF2716 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) no 0.53
    5 GFF683 Transcriptional regulator, LysR family no 0.53
    6 GFF7178 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) no 0.53
    7 GFF2956 Uncharacterized protein YfaT no 0.53
    8 GFF4792 PhnB protein no 0.52
    9 GFF4663 no description no 0.52
    10 GFF3488 Transcriptional regulator, GntR family no 0.52
    11 GFF6087 Transcriptional regulator, AcrR family no 0.52
    12 GFF7010 no description no 0.51
    13 GFF1498 putative 2-pyrone-4,6-dicarboxylic acid hydrolase no 0.51
    14 GFF2724 FIG01220323: hypothetical protein no 0.50
    15 GFF4063 Cytochrome c family protein no 0.50
    16 GFF2580 L-aspartate oxidase (EC 1.4.3.16) no 0.50
    17 GFF3427 FIG01006093: hypothetical protein no 0.50
    18 GFF423 Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) no 0.49
    19 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.49
    20 GFF2904 hypothetical protein no 0.49

    Or look for negative cofitness