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  • Top cofit genes for GFF1099 from Variovorax sp. SCN45

    Na+-driven multidrug efflux pump
    SEED: Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog
    KEGG: multidrug resistance protein, MATE family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF778 Channel-forming transporter/cytolysins activator of TpsB family no 0.57
    2 GFF4012 hypothetical protein no 0.57
    3 GFF7085 BUG/TctC family periplasmic protein no 0.56
    4 GFF4513 no description no 0.55
    5 GFF4870 Glycosidases no 0.53
    6 GFF1902 hypothetical protein no 0.52
    7 GFF6743 no description no 0.51
    8 GFF4947 Erythritol kinase EryA (EC 2.7.1.27) no 0.50
    9 GFF3065 hypothetical protein no 0.50
    10 GFF4090 Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) no 0.50
    11 GFF1232 Uncharacterized protein conserved in bacteria no 0.50
    12 GFF3057 Aspartate aminotransferase (EC 2.6.1.1) no 0.50
    13 GFF636 Urea ABC transporter, substrate-binding protein UrtA no 0.49
    14 GFF7313 hypothetical protein no 0.49
    15 GFF4723 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.49
    16 GFF4656 TonB-dependent siderophore receptor no 0.48
    17 GFF1081 hypothetical protein no 0.48
    18 GFF1089 Polyphosphate kinase (EC 2.7.4.1) 0.50 0.47
    19 GFF6875 hypothetical protein no 0.47
    20 GFF3794 hypothetical protein no 0.47

    Or look for negative cofitness