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  • Top cofit genes for PS417_05560 from Pseudomonas simiae WCS417

    ABC transporter
    SEED: Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4)
    KEGG: glutamate/aspartate transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05545 amino acid ABC transporter ATP-binding protein 0.96 0.35
    2 PS417_03005 arginine decarboxylase 0.39 0.21
    3 PS417_06805 glycerol acyltransferase no 0.20
    4 PS417_28360 hypothetical protein no 0.20
    5 PS417_06110 RND transporter no 0.19
    6 PS417_17800 microcin B17-processing protein McbD no 0.19
    7 PS417_00350 methionine ABC transporter substrate-binding protein 0.51 0.19
    8 PS417_02960 ribosomal protein L11 methyltransferase 0.47 0.19
    9 PS417_04215 malate transporter 0.37 0.19
    10 PS417_18980 3-methyl-2-oxobutanoate hydroxymethyltransferase no 0.19
    11 PS417_22315 DNA-3-methyladenine glycosylase no 0.19
    12 PS417_12260 hypothetical protein no 0.18
    13 PS417_02340 LysR family transcriptional regulator no 0.18
    14 PS417_20545 porin no 0.18
    15 PS417_22250 pseudouridine synthase no 0.18
    16 PS417_14420 acyl-CoA dehydrogenase no 0.18
    17 PS417_20475 hypothetical protein no 0.17
    18 PS417_28140 asparaginase 0.46 0.17
    19 PS417_18235 nitrile hydratase no 0.17
    20 PS417_28135 sodium:alanine symporter 0.84 0.17

    Or look for negative cofitness