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  • Top cofit genes for PS417_05550 from Pseudomonas simiae WCS417

    amino acid ABC transporter permease
    SEED: Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4)
    KEGG: glutamate/aspartate transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05545 amino acid ABC transporter ATP-binding protein 0.94 0.43
    2 PS417_05555 amino acid ABC transporter permease 0.99 0.38
    3 PS417_10925 malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) 0.77 0.28
    4 PS417_11860 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) no 0.26
    5 PS417_11855 Myo-inosose-2 dehydratase (EC 4.2.1.44) (from data) no 0.24
    6 PS417_03310 carbonate dehydratase no 0.24
    7 PS417_14480 glycogen synthase 0.79 0.24
    8 PS417_10920 LysR family transcriptional regulator no 0.24
    9 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.79 0.23
    10 PS417_22400 7-cyano-7-deazaguanine synthase 0.66 0.23
    11 PS417_16005 ATPase 0.83 0.22
    12 PS417_22495 histidine triad (HIT) protein no 0.22
    13 PS417_04270 ribonuclease G 0.75 0.21
    14 PS417_22125 porin 0.26 0.21
    15 PS417_13510 polyketide cyclase no 0.21
    16 PS417_04170 stringent starvation protein A 0.66 0.21
    17 PS417_05570 DeoR faimly transcriptional regulator 0.76 0.21
    18 PS417_26005 biotin synthase 0.57 0.21
    19 PS417_06195 succinyldiaminopimelate aminotransferase 0.77 0.20
    20 PS417_12435 hypothetical protein 0.63 0.20

    Or look for negative cofitness