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  • Top cofit genes for PS417_05540 from Pseudomonas simiae WCS417

    histidine kinase
    SEED: Signal transduction histidine kinase regulating C4-dicarboxylate transport system (EC 2.7.13.3)
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_07090 histidine kinase 0.38 0.74
    2 PS417_07070 membrane protein no 0.72
    3 PS417_07065 tripartite tricarboxylate transporter TctA 0.27 0.70
    4 PS417_07080 porin no 0.70
    5 PS417_07075 tricarboxylic transport membrane protein 0.67 0.69
    6 PS417_07085 transcriptional regulator no 0.62
    7 PS417_05165 cytosol aminopeptidase no 0.61
    8 PS417_21035 multidrug transporter 0.81 0.42
    9 PS417_05510 alpha/beta hydrolase no 0.39
    10 PS417_23210 serine acetyltransferase no 0.38
    11 PS417_26985 phosphoenolpyruvate-protein phosphotransferase no 0.36
    12 PS417_02480 DNA mismatch repair protein 0.27 0.33
    13 PS417_12200 microcin ABC transporter permease 0.31 0.32
    14 PS417_12205 hypothetical protein 0.42 0.32
    15 PS417_26040 malate synthase no 0.30
    16 PS417_27035 FAD-linked oxidase 0.45 0.29
    17 PS417_27010 threonine dehydratase 0.57 0.27
    18 PS417_21750 acetyl-CoA synthetase no 0.26
    19 PS417_16570 isocitrate lyase no 0.26
    20 PS417_01710 histidine utilization repressor 0.60 0.26

    Or look for negative cofitness