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  • Top cofit genes for GFF1090 from Sphingobium sp. HT1-2

    Type IV secretory pathway, VirD2 components (relaxase)
    SEED: Type IV secretory pathway, VirD2 components (relaxase)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3833 Putative activity regulator of membrane protease YbbK no 0.67
    2 GFF3731 Flagellum-specific ATP synthase FliI no 0.65
    3 GFF3438 hypothetical protein no 0.65
    4 GFF2075 hypothetical protein no 0.64
    5 GFF881 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) no 0.64
    6 GFF2727 alpha-L-arabinofuranosidase (EC 3.2.1.55) no 0.63
    7 GFF2279 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.63
    8 GFF3284 ABC transporter no 0.63
    9 GFF5287 hypothetical protein no 0.63
    10 GFF4152 Pyridoxal phosphate-containing protein YggS no 0.62
    11 GFF1071 GTP-binding protein EngA no 0.62
    12 GFF195 Conjugative transfer protein TrbG no 0.62
    13 GFF442 hypothetical protein no 0.61
    14 GFF191 Conjugative transfer protein TrbE no 0.61
    15 GFF1017 hypothetical protein no 0.61
    16 GFF3711 Flagellar hook protein FlgE no 0.60
    17 GFF4112 hypothetical protein no 0.60
    18 GFF1690 Two-component system sensor histidine kinase no 0.60
    19 GFF2965 hypothetical protein no 0.60
    20 GFF5194 Cell filamentation protein fic no 0.59

    Or look for negative cofitness