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  • Top cofit genes for PS417_05525 from Pseudomonas simiae WCS417

    Fis family transcriptional regulator
    SEED: Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05520 histidine kinase 0.82 0.65
    2 PS417_05505 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.89 0.64
    3 PS417_21515 transcriptional regulator 0.72 0.51
    4 PS417_05500 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 0.48 0.49
    5 PS417_14960 ATPase no 0.48
    6 PS417_13805 4-amino-4-deoxy-L-arabinose transferase 0.71 0.42
    7 PS417_13820 UDP-glucose 6-dehydrogenase 0.46 0.40
    8 PS417_05510 alpha/beta hydrolase 0.85 0.40
    9 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase 0.73 0.38
    10 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 0.75 0.36
    11 PS417_05515 hypothetical protein 0.85 0.36
    12 PS417_11825 transcriptional regulator 0.59 0.35
    13 PS417_05140 dipicolinate synthase 0.47 0.35
    14 PS417_14965 transcriptional regulator no 0.35
    15 PS417_02145 potassium transporter KefA 0.49 0.35
    16 PS417_13780 integrase no 0.34
    17 PS417_17785 4-amino-4-deoxy-L-arabinose transferase no 0.32
    18 PS417_04275 hypothetical protein no 0.32
    19 PS417_07120 RNA polymerase sigma-H factor 0.64 0.31
    20 PS417_13785 hypothetical protein 0.29 0.29

    Or look for negative cofitness