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  • Top cofit genes for GFF1072 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6854 RNA polymerase ECF-type sigma factor no 0.60
    2 GFF3462 Urea ABC transporter, permease protein UrtC no 0.60
    3 GFF2978 Aromatic ring-cleaving dioxygenase no 0.55
    4 GFF6122 ABC-type antimicrobial peptide transport system, permease component no 0.53
    5 GFF4663 no description no 0.52
    6 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.51
    7 GFF2322 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) no 0.51
    8 GFF2989 hypothetical protein no 0.51
    9 GFF1138 Transcriptional regulator, AcrR family no 0.50
    10 GFF5195 L-arabinose ABC transporter, ATP-binding protein AraG no 0.49
    11 GFF3319 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.49
    12 GFF683 Transcriptional regulator, LysR family no 0.49
    13 GFF5742 Flagellar motor switch protein FliN no 0.48
    14 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.47
    15 GFF3002 Cobalt-containing nitrile hydratase subunit beta (EC 4.2.1.84) no 0.47
    16 GFF571 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) no 0.47
    17 GFF2336 Transcriptional regulator, AraC family no 0.47
    18 GFF5951 no description no 0.47
    19 GFF7010 no description no 0.46
    20 GFF4537 Tetrapartite efflux system, inner membrane component FusBC-like no 0.46

    Or look for negative cofitness