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  • Top cofit genes for GFF1062 from Variovorax sp. SCN45

    Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
    SEED: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6575 Conjugative transfer protein TrbJ no 0.55
    2 GFF2881 Putative transmembrane protein no 0.52
    3 GFF1110 Recombination protein RecR no 0.52
    4 GFF3304 Monofunctional biosynthetic peptidoglycan transglycosylase no 0.52
    5 GFF3496 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.52
    6 GFF4265 hypothetical protein no 0.51
    7 GFF3309 Beta-hexosaminidase (EC 3.2.1.52) no 0.51
    8 GFF127 Orotate phosphoribosyltransferase (EC 2.4.2.10) no 0.50
    9 GFF3759 Uridine kinase family protein YggC homolog no 0.50
    10 GFF2120 Type IV fimbrial biogenesis protein PilX no 0.49
    11 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) no 0.49
    12 GFF5664 hypothetical protein no 0.48
    13 GFF1429 no description no 0.48
    14 GFF3349 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) no 0.48
    15 GFF1030 Ferredoxin reductase no 0.48
    16 GFF3908 FIG00582414: hypothetical protein no 0.48
    17 GFF6807 BUG/TctC family periplasmic protein no 0.48
    18 GFF6998 Flagellar basal-body rod protein FlgB no 0.47
    19 GFF5984 L-lactate dehydrogenase no 0.47
    20 GFF5472 SEED: DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.47

    Or look for negative cofitness