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Cofit
Protein
Homologs
Top cofit genes for PS417_05345 from
Pseudomonas simiae WCS417
exotoxin
SEED: Minor fimbrial subunit StfE
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_23085
permease
no
0.22
2
PS417
_05080
LysR family transcriptional regulator
no
0.20
3
PS417
_01970
pilus assembly protein
no
0.18
4
PS417
_19920
AraC family transcriptional regulator
no
0.18
5
PS417
_28515
16S rRNA methyltransferase
no
0.18
6
PS417
_20400
hypothetical protein
no
0.17
7
PS417
_17190
MarR family transcriptional regulator
no
0.17
8
PS417
_00505
peptidase M16
no
0.17
9
PS417
_23170
FeS assembly protein IscX
0.53
0.17
10
PS417
_12045
iditol 2-dehydrogenase
no
0.17
11
PS417
_16070
TonB-dependent receptor
no
0.16
12
PS417
_15840
histidine kinase
no
0.16
13
PS417
_17135
LysR family transcriptional regulator
no
0.16
14
PS417
_26375
membrane protein
no
0.16
15
PS417
_20605
hypothetical protein
no
0.16
16
PS417
_15240
hypothetical protein
no
0.16
17
PS417
_09545
aldehyde-activating protein
no
0.16
18
PS417
_13375
LysR family transcriptional regulator
no
0.16
19
PS417
_14905
C4-dicarboxylate ABC transporter
no
0.16
20
PS417
_24315
catalase
no
0.16
Or look for
negative cofitness