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  • Top cofit genes for GFF105 from Sphingobium sp. HT1-2

    ATP-dependent DNA ligase (EC 6.5.1.1) LigC
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
    KEGG: DNA ligase (ATP)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2200 Lysozyme (N-acetylmuramidase) family, (EC 3.2.1.17) no 0.79
    2 GFF1775 Gene Transfer Agent (GTA) ORFG08 no 0.78
    3 GFF2330 hypothetical protein no 0.78
    4 GFF958 Diguanylate cyclase no 0.77
    5 GFF4863 hypothetical protein no 0.76
    6 GFF5280 hypothetical protein no 0.75
    7 GFF509 hypothetical protein no 0.75
    8 GFF4169 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) no 0.75
    9 GFF3111 Subclass B3 beta-lactamase (EC 3.5.2.6) no 0.75
    10 GFF893 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.74
    11 GFF193 Conjugative transfer protein TrbL no 0.73
    12 GFF5130 conserved hypothetical protein-transmembrane prediction no 0.73
    13 GFF1603 hypothetical protein no 0.73
    14 GFF4793 hypothetical protein no 0.73
    15 GFF693 Outer membrane protein romA no 0.73
    16 GFF1071 GTP-binding protein EngA no 0.72
    17 GFF935 hypothetical protein no 0.72
    18 GFF4116 hypothetical protein no 0.72
    19 GFF252 hypothetical protein no 0.72
    20 GFF850 TonB-dependent receptor no 0.71

    Or look for negative cofitness