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  • Top cofit genes for PS417_05305 from Pseudomonas simiae WCS417

    TonB-dependent receptor
    SEED: Zinc-regulated outer membrane receptor
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06840 beta-D-glucoside glucohydrolase 0.39 0.25
    2 PS417_06515 beta-agarase 0.25 0.21
    3 PS417_10285 sodium:proton antiporter 0.19 0.21
    4 PS417_12450 glucose-6-phosphate dehydrogenase no 0.20
    5 PS417_04385 organic solvent ABC transporter substrate-binding protein 0.37 0.19
    6 PS417_26720 twitching motility protein PilT no 0.19
    7 PS417_27995 type IV secretion protein Rhs no 0.19
    8 PS417_26525 DEAD/DEAH box helicase no 0.19
    9 PS417_07405 hypothetical protein no 0.19
    10 PS417_14950 structural protein MipA no 0.19
    11 PS417_02280 GlcNAc-PI de-N-acetylase no 0.19
    12 PS417_09125 (Fe-S)-binding protein no 0.19
    13 PS417_04885 type IV secretion protein Rhs no 0.18
    14 PS417_27275 hypothetical protein no 0.18
    15 PS417_28205 transporter no 0.18
    16 PS417_26775 thiazole synthase 0.47 0.18
    17 PS417_27800 exodeoxyribonuclease III 0.38 0.18
    18 PS417_11900 conjugal transfer protein TraR no 0.18
    19 PS417_03825 laccase 0.43 0.18
    20 PS417_09595 membrane protein no 0.18

    Or look for negative cofitness