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  • Top cofit genes for PS417_05290 from Pseudomonas simiae WCS417

    hypothetical protein
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: putative spermidine/putrescine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08540 RNA helicase no 0.29
    2 PS417_26235 (Fe-S)-binding protein no 0.29
    3 PS417_00385 Fur family transcriptional regulator no 0.28
    4 PS417_01395 biofilm formation protein PelB no 0.27
    5 PS417_16990 acyl-CoA dehydrogenase 0.51 0.27
    6 PS417_27535 chemotaxis protein CheY 0.31 0.27
    7 PS417_01410 transporter no 0.26
    8 PS417_26225 electron transfer flavoprotein subunit beta no 0.26
    9 PS417_01405 sugar transporter no 0.26
    10 PS417_01955 peptidase no 0.26
    11 PS417_11845 RpiR family transcriptional regulator 0.45 0.26
    12 PS417_05635 membrane protein 0.65 0.26
    13 PS417_12205 hypothetical protein no 0.26
    14 PS417_19860 flagellar hook protein FlgL no 0.25
    15 PS417_19435 urate hydroxylase (1.7.3.3) (from data) no 0.25
    16 PS417_19840 flagellar cap protein FliD no 0.25
    17 PS417_22520 histidine kinase no 0.25
    18 PS417_01420 histidine kinase no 0.25
    19 PS417_19865 flagellar hook protein FlgK no 0.25
    20 PS417_01415 glycosyl transferase family 1 no 0.25

    Or look for negative cofitness