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  • Top cofit genes for GFF1040 from Variovorax sp. SCN45

    Oxidoreductase, short-chain dehydrogenase/reductase family
    SEED: 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6525 hypothetical protein no 0.62
    2 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily no 0.59
    3 GFF907 Transcriptional regulator, LysR family no 0.58
    4 GFF4483 ATP-dependent hsl protease ATP-binding subunit HslU 0.32 0.57
    5 GFF5193 Galactofuranose ABC transporter, substrate-binding protein no 0.57
    6 GFF2436 no description no 0.56
    7 GFF3730 Integral membrane protein no 0.56
    8 GFF3135 no description no 0.55
    9 GFF6160 Dehydrogenase molybdenum cofactor insertion protein, XdhC/CoxF family no 0.54
    10 GFF2014 hypothetical protein no 0.54
    11 GFF3368 Pyrimidine permease no 0.53
    12 GFF4955 hypothetical protein no 0.53
    13 GFF3553 FOG: TPR repeat no 0.53
    14 GFF63 Putative glycosyltransferase no 0.53
    15 GFF4993 putative tetratricopeptide repeat family protein no 0.52
    16 GFF6642 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) 0.33 0.52
    17 GFF7048 hypothetical protein no 0.52
    18 GFF3964 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) no 0.51
    19 GFF5074 Two-component transcriptional response regulator Dtpsy_0213, OmpR family no 0.51
    20 GFF4909 Two-component transcriptional response regulator, OmpR family no 0.51

    Or look for negative cofitness