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Cofit
Protein
Homologs
Top cofit genes for GFF1037 from
Variovorax sp. SCN45
putative membrane protein
SEED: membrane protein, putative
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4024
Transcriptional regulator, MerR family
no
0.55
2
GFF1923
ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.54
3
GFF5285
Fe2+-dicitrate sensor, membrane component
no
0.53
4
GFF6831
hypothetical protein
no
0.53
5
GFF5532
Putative oxidoreductase
no
0.52
6
GFF6276
Uncharacterized MFS-type transporter
no
0.52
7
GFF71
Aminoglycoside 3''-nucleotidyltransferase (EC 2.7.7.-) => ANT(3'')-Ia (AadA family)
no
0.50
8
GFF7138
ATP-dependent 23S rRNA helicase DbpA
no
0.50
9
GFF5614
hypothetical protein
no
0.50
10
GFF4150
Salicylate hydroxylase (EC 1.14.13.1)
no
0.49
11
GFF7262
no description
no
0.49
12
GFF4959
ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.48
13
GFF1859
ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
no
0.48
14
GFF4913
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.48
15
GFF2121
Type IV fimbrial biogenesis protein PilY1
no
0.48
16
GFF4127
Dibenzothiophene desulfurization enzyme B
no
0.48
17
GFF635
Urea ABC transporter, permease protein UrtB
no
0.47
18
GFF2672
ABC transporter, ATP-binding protein
no
0.47
19
GFF3130
hypothetical protein
no
0.46
20
GFF3216
hypothetical protein
no
0.46
Or look for
negative cofitness