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  • Top cofit genes for GFF1037 from Variovorax sp. SCN45

    putative membrane protein
    SEED: membrane protein, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4024 Transcriptional regulator, MerR family no 0.55
    2 GFF1923 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.54
    3 GFF5285 Fe2+-dicitrate sensor, membrane component no 0.53
    4 GFF6831 hypothetical protein no 0.53
    5 GFF5532 Putative oxidoreductase no 0.52
    6 GFF6276 Uncharacterized MFS-type transporter no 0.52
    7 GFF71 Aminoglycoside 3''-nucleotidyltransferase (EC 2.7.7.-) => ANT(3'')-Ia (AadA family) no 0.50
    8 GFF7138 ATP-dependent 23S rRNA helicase DbpA no 0.50
    9 GFF5614 hypothetical protein no 0.50
    10 GFF4150 Salicylate hydroxylase (EC 1.14.13.1) no 0.49
    11 GFF7262 no description no 0.49
    12 GFF4959 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.48
    13 GFF1859 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.48
    14 GFF4913 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.48
    15 GFF2121 Type IV fimbrial biogenesis protein PilY1 no 0.48
    16 GFF4127 Dibenzothiophene desulfurization enzyme B no 0.48
    17 GFF635 Urea ABC transporter, permease protein UrtB no 0.47
    18 GFF2672 ABC transporter, ATP-binding protein no 0.47
    19 GFF3130 hypothetical protein no 0.46
    20 GFF3216 hypothetical protein no 0.46

    Or look for negative cofitness