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  • Top cofit genes for GFF1036 from Variovorax sp. SCN45

    diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4970 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.53
    2 GFF6502 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.52
    3 GFF6016 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.50
    4 GFF2247 hypothetical protein no 0.48
    5 GFF4094 no description no 0.48
    6 GFF406 hypothetical protein no 0.47
    7 GFF6735 hypothetical protein no 0.47
    8 GFF1333 para-nitrobenzyl esterase (intracellular esterase B) no 0.46
    9 GFF5820 hypothetical protein no 0.45
    10 GFF3225 hypothetical protein no 0.45
    11 GFF407 no description no 0.45
    12 GFF7386 no description no 0.45
    13 GFF4915 hypothetical protein no 0.45
    14 GFF3293 Inner membrane protein YbhQ no 0.44
    15 GFF5928 hypothetical protein no 0.43
    16 GFF5901 no description no 0.43
    17 GFF801 Murein hydrolase activator NlpD no 0.43
    18 GFF5476 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.42
    19 GFF4365 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.42
    20 GFF6508 hypothetical protein no 0.42

    Or look for negative cofitness