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  • Top cofit genes for PS417_05240 from Pseudomonas simiae WCS417

    Lon protease
    SEED: ATP-dependent protease La (EC 3.4.21.53) Type I
    KEGG: ATP-dependent Lon protease

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01620 preprotein translocase subunit SecB 0.55 0.26
    2 PS417_03330 Short chain fatty acid transporter 0.29 0.26
    3 PS417_20930 50S rRNA methyltransferase 0.52 0.20
    4 PS417_25395 excinuclease ABC subunit A 0.65 0.20
    5 PS417_02405 hypothetical protein 0.66 0.20
    6 PS417_07120 RNA polymerase sigma-H factor 0.54 0.19
    7 PS417_02145 potassium transporter KefA no 0.19
    8 PS417_26370 RNA helicase no 0.18
    9 PS417_03705 2-alkenal reductase 0.27 0.18
    10 PS417_20800 recombination protein RecR 0.63 0.18
    11 PS417_03005 arginine decarboxylase no 0.17
    12 PS417_24590 acyl-CoA dehydrogenase 0.64 0.17
    13 PS417_14960 ATPase no 0.17
    14 PS417_08000 beta-hydroxylase no 0.17
    15 PS417_07035 uracil-DNA glycosylase no 0.17
    16 PS417_11020 L-arabinolactonase (EC 3.1.1.15) (from data) no 0.17
    17 PS417_14945 beta-lactamase no 0.17
    18 PS417_18685 excinuclease ABC subunit B 0.54 0.16
    19 PS417_05225 tRNA methyltransferase no 0.16
    20 PS417_21125 phosphoadenosine phosphosulfate reductase 0.52 0.16

    Or look for negative cofitness