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  • Top cofit genes for GFF1027 from Variovorax sp. SCN45

    Ribonuclease BN
    SEED: Ribonuclease BN (EC 3.1.-.-)
    KEGG: membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4656 TonB-dependent siderophore receptor no 0.61
    2 GFF492 no description no 0.58
    3 GFF6390 GtrA-like protein no 0.57
    4 GFF2531 Transcriptional regulator, AsnC family no 0.56
    5 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.55
    6 GFF1558 Uncharacterized ATP-dependent DNA helicase PA3272 no 0.55
    7 GFF3836 Cyclic beta-1,2-glucan synthase (EC 2.4.1.-) no 0.54
    8 GFF672 Transcriptional regulator, LysR family no 0.54
    9 GFF1410 hypothetical protein no 0.51
    10 GFF6111 Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) no 0.51
    11 GFF2752 FIG00974677: hypothetical protein 0.38 0.50
    12 GFF1907 Transcriptional regulator, AraC family 0.20 0.50
    13 GFF4021 Uncharacterized MFS-type transporter no 0.49
    14 GFF4393 Uncharacterized ABC1 family protein XCC_1720 no 0.49
    15 GFF793 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.49
    16 GFF1313 Cellulose synthase operon protein C no 0.48
    17 GFF3852 Tetrapyrrole methylase family protein 0.65 0.48
    18 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.48
    19 GFF4159 no description no 0.47
    20 GFF1243 transglutaminase, N-terminal domain protein no 0.47

    Or look for negative cofitness