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  • Top cofit genes for GFF1023 from Variovorax sp. SCN45

    UPF0311 protein RPA1785
    SEED: UPF0311 protein RPA1785

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF958 ElaB protein no 0.54
    2 GFF2432 Fe2+-dicitrate sensor, membrane component no 0.53
    3 GFF3863 RNA polymerase sigma factor RpoE no 0.53
    4 GFF7053 Transcriptional regulator, LysR family no 0.52
    5 GFF3356 Probable transmembrane protein no 0.52
    6 GFF2606 Tripartite tricarboxylate transporter TctC family no 0.51
    7 GFF6610 putative lipoprotein no 0.50
    8 GFF6609 FIG00957806: hypothetical protein no 0.49
    9 GFF6684 ABC transporter, ATP-binding protein no 0.49
    10 GFF1252 Alkanesulfonate ABC transporter permease protein SsuC no 0.48
    11 GFF6073 Tripartite tricarboxylate transporter TctA family no 0.47
    12 GFF3666 Inner membrane protein YbiR, putative anion permease no 0.47
    13 GFF7099 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) no 0.47
    14 GFF7139 MATE efflux family protein no 0.46
    15 GFF519 Transcriptional regulator, AcrR family no 0.46
    16 GFF6276 Uncharacterized MFS-type transporter no 0.46
    17 GFF5285 Fe2+-dicitrate sensor, membrane component no 0.45
    18 GFF4812 no description no 0.44
    19 GFF6475 hypothetical protein no 0.44
    20 GFF3397 Benzoate ABC transporter, substrate-binding protein no 0.44

    Or look for negative cofitness