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Cofit
Protein
Homologs
Top cofit genes for GFF1023 from
Variovorax sp. SCN45
UPF0311 protein RPA1785
SEED: UPF0311 protein RPA1785
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF958
ElaB protein
no
0.54
2
GFF2432
Fe2+-dicitrate sensor, membrane component
no
0.53
3
GFF3863
RNA polymerase sigma factor RpoE
no
0.53
4
GFF7053
Transcriptional regulator, LysR family
no
0.52
5
GFF3356
Probable transmembrane protein
no
0.52
6
GFF2606
Tripartite tricarboxylate transporter TctC family
no
0.51
7
GFF6610
putative lipoprotein
no
0.50
8
GFF6609
FIG00957806: hypothetical protein
no
0.49
9
GFF6684
ABC transporter, ATP-binding protein
no
0.49
10
GFF1252
Alkanesulfonate ABC transporter permease protein SsuC
no
0.48
11
GFF6073
Tripartite tricarboxylate transporter TctA family
no
0.47
12
GFF3666
Inner membrane protein YbiR, putative anion permease
no
0.47
13
GFF7099
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10)
no
0.47
14
GFF7139
MATE efflux family protein
no
0.46
15
GFF519
Transcriptional regulator, AcrR family
no
0.46
16
GFF6276
Uncharacterized MFS-type transporter
no
0.46
17
GFF5285
Fe2+-dicitrate sensor, membrane component
no
0.45
18
GFF4812
no description
no
0.44
19
GFF6475
hypothetical protein
no
0.44
20
GFF3397
Benzoate ABC transporter, substrate-binding protein
no
0.44
Or look for
negative cofitness