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  • Top cofit genes for PS417_05145 from Pseudomonas simiae WCS417

    23S rRNA methyltransferase
    SEED: Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51)
    KEGG: ribosomal RNA large subunit methyltransferase F

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_07085 transcriptional regulator no 0.20
    2 PS417_07065 tripartite tricarboxylate transporter TctA 0.29 0.19
    3 PS417_08395 ABC transporter permease 0.33 0.18
    4 PS417_11395 hypothetical protein no 0.18
    5 PS417_07090 histidine kinase no 0.18
    6 PS417_02925 membrane protein 0.36 0.18
    7 PS417_16855 cation:proton antiporter no 0.18
    8 PS417_07070 membrane protein no 0.17
    9 PS417_23915 pantoate--beta-alanine ligase 0.22 0.17
    10 PS417_28050 hypothetical protein 0.33 0.17
    11 PS417_06090 extensin no 0.17
    12 PS417_08425 acetyltransferase 0.37 0.17
    13 PS417_17770 ABC transporter permease no 0.16
    14 PS417_11200 membrane protein no 0.16
    15 PS417_10420 shikimate dehydrogenase 0.39 0.16
    16 PS417_22535 ornithine acetyltransferase no 0.16
    17 PS417_25700 cyclic AMP receptor protein 0.16 0.16
    18 PS417_05085 ribosomal subunit interface protein no 0.16
    19 PS417_13450 serine 3-dehydrogenase no 0.16
    20 PS417_04730 bifunctional glyoxylate/hydroxypyruvate reductase B 0.38 0.16

    Or look for negative cofitness