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Cofit
Protein
Homologs
Top cofit genes for GFF1006 from
Sphingobium sp. HT1-2
hypothetical protein
SEED: Rhamnogalacturonide transporter RhiT
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4603
hypothetical protein
no
0.81
2
GFF925
Acyl-CoA dehydrogenase
no
0.74
3
GFF2965
hypothetical protein
no
0.73
4
GFF4937
putative 3-oxoacyl-[acyl-carrier-protein] reductase
no
0.72
5
GFF2968
hypothetical protein
no
0.72
6
GFF3825
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
no
0.70
7
GFF3285
ABC transporter, ATP-binding protein
0.42
0.70
8
GFF5151
RNA polymerase ECF-type sigma factor
no
0.69
9
GFF1770
Gene Transfer Agent tail tape measure
no
0.68
10
GFF4331
Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4)
no
0.68
11
GFF961
Cytochrome b561
0.19
0.68
12
GFF4785
Thioredoxin reductase (EC 1.8.1.9)
no
0.66
13
GFF5162
RNA polymerase, sigma-24 subunit, ECF subfamily
no
0.66
14
GFF4512
MCP methyltransferase, CheR-type
no
0.66
15
GFF1709
protein of unknown function DUF1452
no
0.65
16
GFF2245
Thioesterase superfamily
no
0.65
17
GFF1957
hypothetical protein
no
0.65
18
GFF3751
FIG01095692: hypothetical protein
no
0.65
19
GFF354
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)
no
0.64
20
GFF2259
'5'-nucleotidase SurE (EC 3.1.3.5)' transl_table=11
no
0.64
Or look for
negative cofitness