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  • Top cofit genes for PS417_05080 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Glycine cleavage system transcriptional activator
    KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05075 serine dehydratase 1.00 0.56
    2 PS417_02520 chemotaxis protein no 0.38
    3 PS417_21580 chemotaxis protein CheW no 0.32
    4 PS417_06895 DNA-binding protein 0.39 0.29
    5 PS417_04900 amino acid ABC transporter substrate-binding protein 0.75 0.29
    6 PS417_20105 glycosyl transferase no 0.29
    7 PS417_01990 cell division protein no 0.28
    8 PS417_20095 hypothetical protein no 0.27
    9 PS417_00385 Fur family transcriptional regulator no 0.27
    10 PS417_02440 flagellar motor protein MotB 0.32 0.25
    11 PS417_22555 chemotaxis protein no 0.25
    12 PS417_01955 peptidase 0.33 0.25
    13 PS417_21595 flagellar biosynthesis protein FlgN no 0.25
    14 PS417_12045 iditol 2-dehydrogenase 0.31 0.25
    15 PS417_27335 flagellar basal body protein FliL no 0.24
    16 PS417_01640 histidine kinase no 0.24
    17 PS417_08540 RNA helicase no 0.24
    18 PS417_19685 protein phosphatase 0.34 0.24
    19 PS417_20090 DegT/DnrJ/EryC1/StrS aminotransferase 0.34 0.23
    20 PS417_04375 ABC transporter ATP-binding protein no 0.23

    Or look for negative cofitness