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  • Top cofit genes for GFF1 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3429 Transcriptional regulator, AraC family no 0.54
    2 GFF4465 Transcriptional regulator, LysR family no 0.53
    3 GFF1361 no description no 0.53
    4 GFF3366 Septum site-determining protein MinD no 0.52
    5 GFF46 Transcriptional regulators of sugar metabolism no 0.52
    6 GFF3819 hypothetical protein no 0.50
    7 GFF45 Phospholipase C (EC 3.1.4.3) no 0.50
    8 GFF623 Demethylmenaquinone methyltransferase-like protein no 0.48
    9 GFF4135 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.48
    10 GFF5818 Two-component transcriptional response regulator, NarL/FixJ family no 0.48
    11 GFF1678 Transcriptional regulator, GntR family no 0.46
    12 GFF646 no description no 0.46
    13 GFF6574 Conjugative transfer protein TrbL no 0.46
    14 GFF5426 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.45
    15 GFF5299 TonB-dependent receptor no 0.45
    16 GFF5135 DNA repair exonuclease family protein YhaO no 0.44
    17 GFF6781 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) / Aminodeoxychorismate lyase (EC 4.1.3.38) no 0.44
    18 GFF6398 SH3, type 3 no 0.44
    19 GFF3373 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) no 0.43
    20 GFF6817 hypothetical protein no 0.43

    Or look for negative cofitness