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Cofit
Protein
Homologs
Top cofit genes for EX28DRAFT_4196 from
Enterobacter asburiae PDN3
YjcZ-like protein
SEED: Methyl-accepting chemotaxis protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
EX28DRAFT
_2720
Small protein A (tmRNA-binding)
0.24
0.78
2
EX28DRAFT
_1856
flagellar hook-basal body protein
no
0.74
3
EX28DRAFT
_0659
Flagellar transcriptional activator (FlhC)
0.46
0.72
4
EX28DRAFT
_0660
flagellar motor stator protein MotA
no
0.72
5
EX28DRAFT
_1801
Signal transduction histidine kinase
no
0.68
6
EX28DRAFT
_0625
RNA polymerase sigma factor, FliA/WhiG family
no
0.67
7
EX28DRAFT
_0608
flagellar motor switch protein FliN
no
0.66
8
EX28DRAFT
_0607
flagellar biosynthetic protein FliO
0.51
0.65
9
EX28DRAFT
_4540
Endonuclease V (EC 3.1.21.-)
no
0.65
10
EX28DRAFT
_0614
Flagellar biosynthesis/type III secretory pathway protein
no
0.65
11
EX28DRAFT
_3878
lipopolysaccharide heptosyltransferase III, putative
no
0.64
12
EX28DRAFT
_1851
flagellar rod assembly protein/muramidase FlgJ
no
0.64
13
EX28DRAFT
_0612
flagellar export protein FliJ
no
0.64
14
EX28DRAFT
_0616
flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
0.60
0.63
15
EX28DRAFT
_1800
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
no
0.63
16
EX28DRAFT
_3557
Bacterial regulatory proteins, luxR family
no
0.63
17
EX28DRAFT
_2213
dethiobiotin synthase
no
0.63
18
EX28DRAFT
_2937
hypothetical protein
no
0.63
19
EX28DRAFT
_0413
TIGR00659 family protein
no
0.62
20
EX28DRAFT
_0869
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
no
0.62
Or look for
negative cofitness