Top cofit genes for EX28DRAFT_3295 from Enterobacter asburiae PDN3

Predicted Zn-dependent proteases and their inactivated homologs
SEED: TldD protein, part of TldE/TldD proteolytic complex
KEGG: TldD protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EX28DRAFT_2839		protein-L-isoaspartate(D-aspartate) O-methyltransferase	0.81	0.88
2	EX28DRAFT_2287		phosphoglucomutase, alpha-D-glucose phosphate-specific	0.31	0.80
3	EX28DRAFT_0755		ribonuclease D	0.43	0.80
4	EX28DRAFT_2148		Uncharacterized protein conserved in bacteria	no	0.76
5	EX28DRAFT_3073		type I secretion outer membrane protein, TolC family	0.41	0.75
6	EX28DRAFT_2331		D-alanyl-D-alanine carboxypeptidase	0.49	0.75
7	EX28DRAFT_1193		diguanylate cyclase (GGDEF) domain	no	0.74
8	EX28DRAFT_2864		(p)ppGpp synthetase, RelA/SpoT family	no	0.74
9	EX28DRAFT_2298		N-acetylglucosamine-6-phosphate deacetylase	0.72	0.74
10	EX28DRAFT_0726		C-terminal peptidase (prc)	0.49	0.74
11	EX28DRAFT_0329		NADH-quinone oxidoreductase, chain I	0.72	0.73
12	EX28DRAFT_4327		transcriptional regulator, IclR family	0.46	0.73
13	EX28DRAFT_0325		NADH-quinone oxidoreductase, F subunit	0.70	0.72
14	EX28DRAFT_0764		fatty acid metabolism transcriptional regulator FadR	0.20	0.72
15	EX28DRAFT_2112		Integrase core domain	no	0.72
16	EX28DRAFT_1045		Gamma-aminobutyrate permease and related permeases	no	0.72
17	EX28DRAFT_2496		The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	0.86	0.71
18	EX28DRAFT_2529		Parvulin-like peptidyl-prolyl isomerase	0.88	0.71
19	EX28DRAFT_3937		Transcriptional regulators	no	0.71
20	EX28DRAFT_2974		transketolase, bacterial and yeast	no	0.71

Or look for negative cofitness