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Cofit
Protein
Homologs
Top cofit genes for EX28DRAFT_3109 from
Enterobacter asburiae PDN3
Mu-like prophage FluMu protein gp41
SEED: Tail protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
EX28DRAFT
_0856
Transcriptional regulators
0.70
0.55
2
EX28DRAFT
_2798
Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains
no
0.48
3
EX28DRAFT
_0385
FOG: EAL domain
no
0.48
4
EX28DRAFT
_1212
urea ABC transporter, ATP-binding protein UrtD
no
0.48
5
EX28DRAFT
_2140
glycyl-radical enzyme activating protein
no
0.45
6
EX28DRAFT
_4249
HAD superfamily (subfamily IIIB) phosphatase, TIGR01672
no
0.44
7
EX28DRAFT
_3039
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
no
0.44
8
EX28DRAFT
_2925
Predicted membrane protein
no
0.44
9
EX28DRAFT
_2901
prepilin-type N-terminal cleavage/methylation domain
no
0.43
10
EX28DRAFT
_3146
ABC-type sugar transport system, periplasmic component
no
0.42
11
EX28DRAFT
_0816
Anaphase-promoting complex, cyclosome, subunit 3
no
0.42
12
EX28DRAFT
_2099
Spermidine/putrescine-binding periplasmic protein
no
0.42
13
EX28DRAFT
_1496
Amino acid transporters
no
0.42
14
EX28DRAFT
_1728
hexose kinase, 1-phosphofructokinase family
no
0.42
15
EX28DRAFT
_2855
putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE
no
0.42
16
EX28DRAFT
_3355
succinate dehydrogenase subunit A (EC 1.3.5.1)
no
0.41
17
EX28DRAFT
_1107
Transcriptional regulator
0.42
0.41
18
EX28DRAFT
_0501
colanic acid biosynthesis acetyltransferase WcaF
0.26
0.41
19
EX28DRAFT
_0801
Serine/threonine protein phosphatase
no
0.41
20
EX28DRAFT
_0484
RND family efflux transporter, MFP subunit
no
0.41
Or look for
negative cofitness