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Cofit
Top cofit genes for EX28DRAFT_2890 from
Enterobacter asburiae PDN3
tRNA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
EX28DRAFT
_4299
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
no
0.71
2
EX28DRAFT
_2111
hypothetical protein
no
0.62
3
EX28DRAFT
_0448
2,4-diaminobutyrate 4-transaminases
no
0.61
4
EX28DRAFT
_2004
aminopeptidase N, Escherichia coli type
no
0.60
5
EX28DRAFT
_3320
hypothetical protein
no
0.57
6
EX28DRAFT
_0314
Uncharacterized protein conserved in bacteria
no
0.55
7
EX28DRAFT
_0039
16S rRNA (cytosine(967)-C(5))-methyltransferase
no
0.55
8
EX28DRAFT
_0116
FeS assembly protein IscX
no
0.54
9
EX28DRAFT
_1984
regulator of competence-specific genes
no
0.54
10
EX28DRAFT
_0075
positive regulator of sigma(E), RseC/MucC
no
0.53
11
EX28DRAFT
_1205
Transcriptional regulators
no
0.52
12
EX28DRAFT
_2241
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54)
no
0.52
13
EX28DRAFT
_1821
NADH dehydrogenase, FAD-containing subunit
no
0.52
14
EX28DRAFT
_1618
adenosine deaminase
no
0.51
15
EX28DRAFT
_1827
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
no
0.51
16
EX28DRAFT
_0931
Response regulator
no
0.51
17
EX28DRAFT
_1674
ABC-type metal ion transport system, periplasmic component/surface antigen
no
0.51
18
EX28DRAFT
_0199
coproporphyrinogen oxidase (EC 1.3.3.3)
no
0.49
19
EX28DRAFT
_1136
Uncharacterized conserved protein (DUF2132)
no
0.49
20
EX28DRAFT
_3901
ATP-dependent DNA helicase RecG (EC 3.6.1.-)
no
0.49
Or look for
negative cofitness