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  • Top cofit genes for EFB2_04858 from Escherichia fergusonii Becca

    ATP-dependent RNA helicase RhlB
    SEED: ATP-dependent RNA helicase RhlB
    KEGG: ATP-dependent RNA helicase RhlB

    Rank Hit Name Description Conserved? Cofitness  
    1 EFB2_03526 Bacteriophage adsorption protein A 0.69 0.92
    2 EFB2_00270 Cellulose biosynthesis protein BcsG no 0.91
    3 EFB2_00278 Cellulose synthase operon protein C no 0.90
    4 EFB2_00275 Cellulose synthase catalytic subunit [UDP-forming] no 0.90
    5 EFB2_02208 putative diguanylate cyclase DgcJ no 0.89
    6 EFB2_00276 Cyclic di-GMP-binding protein no 0.89
    7 EFB2_00272 Cyclic di-GMP binding protein BcsE 0.60 0.88
    8 EFB2_00274 Cellulose biosynthesis protein BcsQ no 0.88
    9 EFB2_03179 ATP-dependent Clp protease ATP-binding subunit ClpA 0.85 0.87
    10 EFB2_00440 Cell division protein DamX no 0.86
    11 EFB2_03525 hypothetical protein 0.69 0.86
    12 EFB2_00813 Hydrogenase-2 large chain no 0.86
    13 EFB2_03347 UDP-glucose 4-epimerase 0.90 0.85
    14 EFB2_03777 Gamma-glutamyl phosphate reductase 0.43 0.85
    15 EFB2_03778 Glutamate 5-kinase no 0.85
    16 EFB2_00812 putative Ni/Fe-hydrogenase 2 b-type cytochrome subunit no 0.84
    17 EFB2_00811 Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit no 0.83
    18 EFB2_00273 Protein YhjR no 0.82
    19 EFB2_01617 Glycerol-3-phosphate transporter no 0.82
    20 EFB2_01046 HTH-type transcriptional regulator GalR no 0.81

    Or look for negative cofitness