Top cofit genes for EFB2_00029 from Escherichia fergusonii Becca

Transcriptional regulatory protein UhpA
SEED: Transcriptional regulatory protein UhpA
KEGG: two-component system, NarL family, uhpT operon response regulator UhpA

Rank	Hit	Name	Description	Conserved?	Cofitness
1	EFB2_03794		Putative glutamine amidotransferase YafJ	0.24	0.44
2	EFB2_01165		tRNA pseudouridine synthase D	no	0.44
3	EFB2_00783		hypothetical protein	no	0.39
4	EFB2_00771		Putative acid--amine ligase YgiC	no	0.39
5	EFB2_03474		Citrate lyase acyl carrier protein	no	0.38
6	EFB2_01681		Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase	no	0.38
7	EFB2_04271		HTH-type transcriptional regulator GntR	no	0.38
8	EFB2_04779		Sec-independent protein translocase protein TatA	no	0.36
9	EFB2_03419		4-hydroxy-tetrahydrodipicolinate synthase	no	0.36
10	EFB2_04016		Non-specific ribonucleoside hydrolase RihC	no	0.35
11	EFB2_03975		Putative inhibitor of glucose uptake transporter SgrT	no	0.35
12	EFB2_03235		hypothetical protein	no	0.35
13	EFB2_00539		Protein Smg	0.36	0.34
14	EFB2_02739		Endo-type membrane-bound lytic murein transglycosylase A	no	0.34
15	EFB2_01096		hypothetical protein	no	0.33
16	EFB2_01620		hypothetical protein	no	0.33
17	EFB2_03472		Sensor histidine kinase DpiB	no	0.33
18	EFB2_02219		Inner membrane metabolite transport protein YdjE	0.62	0.33
19	EFB2_01429		hypothetical protein	no	0.33
20	EFB2_04067		Putative glycyl-radical enzyme activating enzyme YjjW	no	0.32

Or look for negative cofitness