Top cofit genes for ECD_r00015 from Escherichia coli BL21

23S ribosomal RNA

Rank	Hit	Name	Description	Conserved?	Cofitness
1	ECD_02302		nucleoside (except guanosine) transporter	no	0.79
2	ECD_02661		cysteine sulfinate desulfinase	no	0.78
3	ECD_04121		protein inhibitor of RNase E	no	0.74
4	ECD_03598		adenine permease, high affinity; adenine:H+ symporter	no	0.74
5	ECD_02423		isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor	no	0.73
6	ECD_03000		PTS system, N-acetylgalactosamine-specific IID component	no	0.73
7	ECD_00142		poly(A) polymerase	no	0.73
8	ECD_01629		transcriptional repressor, hypoxanthine-binding	no	0.72
9	ECD_00725		acyl-CoA thioesterase, lipoprotein	no	0.71
10	ECD_02657		23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent	no	0.71
11	ECD_02812		hypothetical protein	no	0.69
12	ECD_02854		hypothetical protein	no	0.69
13	ECD_02894		GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system; biofilm/motility regulator; anti-repressor	no	0.69
14	ECD_02244		putative semialdehyde dehydrogenase	no	0.69
15	ECD_02268		long-chain fatty acid outer membrane transporter	no	0.69
16	ECD_04354		nucleoid-associated oriC-binding protein; H-NS and StpA stabilizing factor	no	0.68
17	ECD_03848		transcriptional repressor of fabA and fabB	no	0.68
18	ECD_01124		spermidine/putrescine ABC transporter ATPase	no	0.67
19	ECD_02817		KpsU protein	no	0.67
20	ECD_02877		UPF0114 family putative inner membrane protein	no	0.67

Or look for negative cofitness