Top cofit genes for ECD_04001 from Escherichia coli BL21

dipeptide and tripeptide permease
SEED: Di/tripeptide permease YjdL
KEGG: proton-dependent oligopeptide transporter, POT family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	ECD_00112		pyruvate dehydrogenase complex repressor; autorepressor	0.20	0.69
2	ECD_02941		fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component	0.65	0.65
3	ECD_02790		tRNA m(7)G46 methyltransferase, SAM-dependent	no	0.64
4	ECD_01897		ssuEADCB/tauABCD operon transcriptional activator	no	0.63
5	ECD_04110		magnesium transporter	0.46	0.63
6	ECD_02530		NrdEF cluster assembly flavodoxin	0.64	0.62
7	ECD_01082		23S rRNA pseudouridine(955,2504,2580) synthase	0.65	0.62
8	ECD_00371		tRNA s(4)U8 sulfurtransferase	no	0.62
9	ECD_02766		Phe-Phe periplasmic metalloprotease, OM lipoprotein; low salt-inducible; Era-binding heat shock protein	no	0.62
10	ECD_00375		putative transporter	no	0.62
11	ECD_03936		guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter	0.48	0.61
12	ECD_02791		adenine DNA glycosylase	no	0.60
13	ECD_00636		N-acetyl glucosamine specific PTS enzyme IIC, IIB, and IIA components	no	0.60
14	ECD_01489		transcriptional repressor of multiple antibiotic resistance	no	0.59
15	ECD_02741		UPF0149 family protein	no	0.59
16	ECD_03562		sulfatase/phosphatase superfamily protein	0.63	0.59
17	ECD_00069		thiamine/thiamine pyrophosphate ABC transporter permease	no	0.58
18	ECD_00066		ara regulon transcriptional activator; autorepressor	0.33	0.58
19	ECD_03961		d-allose-inducible als operon transcriptional repressor; autorepressor; repressor of rpiR	no	0.58
20	ECD_00077		leu operon leader peptide	no	0.57

Or look for negative cofitness