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Cofit
Protein
Homologs
Top cofit genes for ECD_03929 from
Escherichia coli BL21
DUF419 family protein
SEED: Protein yjbR
Rank
Hit
Name
Description
Conserved?
Cofitness
1
ECD
_01878
excinuclease UvrABC, endonuclease subunit
0.45
0.60
2
ECD
_01815
exodeoxyribonuclease 10; DNA exonuclease X
0.25
0.57
3
ECD
_01221
oligopeptide ABC transporter ATPase
no
0.54
4
ECD
_00594
fluoride efflux channel, dual topology membrane protein
no
0.52
5
ECD
_03884
GNAT-family putative N-acetyltransferase; acetyl coenzyme A-binding protein
0.27
0.52
6
ECD
_01358
tyramine oxidase, copper-requiring
no
0.51
7
ECD
_03920
uncharacterized protein
no
0.48
8
ECD
_02114
putative ATP-dependent DNA or RNA helicase
no
0.48
9
ECD
_01055
N-methyltryptophan oxidase, FAD-binding
no
0.48
10
ECD
_01735
protease IV (signal peptide peptidase)
no
0.48
11
ECD
_03828
catalase-peroxidase HPI, heme b-containing
0.37
0.47
12
ECD
_03583
gap repair protein
0.42
0.47
13
ECD
_01914
exodeoxyribonuclease I; exonuclease I
no
0.46
14
ECD
_04072
putative oxidoreductase
no
0.46
15
ECD
_02667
exonuclease V (RecBCD complex), alpha chain
no
0.45
16
ECD
_00575
alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding
0.31
0.45
17
ECD
_02051
hypothetical protein
no
0.45
18
ECD
_01177
putative adhesin
no
0.45
19
ECD
_04147
hypothetical protein
no
0.44
20
ECD
_03604
carbohydrate-specific outer membrane porin, cryptic
no
0.44
Or look for
negative cofitness